2023
Espadas I, Wingfield J, Brinman E, Ghosh I, Chanda K, Nakahata Y, Bauer K, Raveendra B, Kiebler M, Yasuda R, Rangaraju V, Puthanveettil SV. SLAMR, a synaptically targeted lncRNA, facilitates the consolidation of contextual fear memory. Res Sq [Preprint]. 2023 Mar 14:rs.3.rs-2489387. doi: 10.21203/rs.3.rs-2489387/v1. PMID: 36993323; PMCID: PMC10055528.
Sadhu A, Badal KK, Zhao Y, Ali AA, Swarnkar S, Tsaprailis G, Crynen GC, Puthanveettil SV. Short-Term and Long-Term Sensitization Differentially Alters the Composition of an Anterograde Transport Complex in <i>Aplysia</i>. eNeuro. 2023 Jan 5;10(1):ENEURO.0266-22.2022. doi: 10.1523/ENEURO.0266-22.2022. PMID: 36549915; PMCID: PMC9829102.
2022
Badal KK, Puthanveettil SV. Axonal transport deficits in neuropsychiatricdisorders. Mol Cell Neurosci. 2022 Dec;123:103786. doi:10.1016/j.mcn.2022.103786. Epub 2022 Oct 14. PMID: 36252719.
Badal K, Zhao Y, Miller KE, Puthanveettil SV. Live Imaging and Quantitative Analysis of Organelle Transport in Sensory Neurons of Aplysia Californica. Methods Mol Biol. 2022;2431:23-48. doi: 10.1007/978-1-0716-1990-2_2. PMID:35412270.
2021
Swarnkar S, Avchalumov Y, Espadas I, Grinman E, Liu XA, Raveendra BL, Zucca A, Mediouni S, Sadhu A, Valente S, Page D, Miller K, Puthanveettil SV. Molecular motor protein KIF5C mediates structural plasticity and long-term memory by constraining local translation. Cell Rep. 2021 Jul 13;36(2):109369. doi:10.1016/j.celrep.2021.109369. PMID: 34260917; PMCID: PMC8319835. (PubMed Link).
Puthanveettil SV. The emerging RNA-centric world of neurobiology. RNA Biol. 2021 Jul;18(7):933-935. doi: 10.1080/15476286.2021.1930367. PMID: 34142924; PMCID: PMC8216184. (PubMed Link).
Grinman E, Nakahata Y, Avchalumov Y, Espadas I, Swarnkar S, Yasuda R, Puthanveettil SV. Activity-regulated synaptic targeting of lncRNA ADEPTR mediates structural plasticity by localizing Sptn1 and AnkB in dendrites. Sci Adv. 2021 Apr 16;7(16):eabf0605. doi: 10.1126/sciadv.abf0605. PMID: 33863727; PMCID: PMC8051873. (PubMed Link).
Joseph NF, Swarnkar S, Puthanveettil SV. Double Duty: Mitotic Kinesins and Their Post-Mitotic Functions in Neurons. Cells. 2021 Jan 12;10(1):136. doi: 10.3390/cells10010136. PMID: 33445569; PMCID: PMC7827351. (PubMed Link).
2020
Joseph NF, Grinman E, Swarnkar S, Puthanveettil SV. Molecular Motor KIF3B Acts as a Key Regulator of Dendritic Architecture in Cortical Neurons. Front Cell Neurosci. 2020 Oct 19;14:521199. doi: 10.3389/fncel.2020.521199. PMID: 33192305; PMCID: PMC7604319. (PubMed Link).
Varkuti BH, Kepiro M, Liu Z, Vick K, Avchalumov Y, Pacifico R, MacMullen C, Kamenecka TM, Puthanveetti SV, Davis RL. (2020) Neuron-based high-content assay and screen for CNS active mitotherapeutics. Sci Adv. 6:eaaw8702. (PubMed Link).
2019
Grinman E, Espadas I, Puthanveettil SV. (2019) Emerging roles for long noncoding RNAs in learning, memory and associated disorders. Neurobiol Learn Mem. doi: 10.1016/j.nlm.2019.107034. [Epub ahead of print] (PubMed Link)
Badal KK, Akhmedov K, Lamoureux P, Liu XA, Reich A, Fallahi-Sichani M, Swarnkar S, Miller KE, Puthanveettil SV. (2019) Synapse formation activates a transcriptional program for persistent enhancement in the bi-directional transport of mitochondria. Cell Rep. 26: 507-517. (PubMed Link)
2018
Swarnkar S, Avchalumov Y, Raveendra BL, Grinman E, Puthanveettil SV. (2018) Kinesin family of proteins Kif11 and Kif21B act as inhibitory constraints of excitatory synaptic transmission through distinct mechanisms. Sci Rep. 8:17419. doi: 10.1038/s41598-018-35634-7. (PubMed Link)
Raveendra BL, Swarnkar S, Avchalumov Y, Liu XA, Grinman E, Badal K, Reich A, Pascal BD, Puthanveettil SV. (2018) Long noncoding RNA GM12371 acts as a transcriptional regulator of synapse function. Proc Natl Acad Sci U S A. 115:E10197-10205.(PubMed Link)
Spicer TP, Hubbs C, Vaissiere T, Collia D, Rojas C, Kilinc M, Vick K, Madoux F, Baillargeon P, Shumate J, Martemyanov KA, Page DT, Puthanveettil S, Hodder P, Davis R, Miller CA, Scampavia L, Rumbaugh G. (2017) Improved scalability of neuron based phenotypic screening assays for therapeutic discovery in neuropsychiatric disorders. Molecular Neuropsychiatry 3, 141-150. (PubMed Link)
2017
Rizzo V, Touzani K, Raveendra, BL, Swarnkar S, Lora J, Kadakkuzha BM, Liu XA, Zhang C, Betel D, Stackman RW, Puthanveettil SV. (2017) Encoding of contextual fear memory requires de novo proteins in the prelimbic cortex. Biological Psychiatry: Cognitive Neuroscience and Neuroimaging. 2:158-169. (PubMed Link)
2015
Miller KE, Liu XA, Puthanveettil SV. (2015) Automated measurement of fast mitochondrial transport in neurons. Front Cell Neurosci. 9:435. (PubMed Link)
Rumbaugh G, Sillivan SE, Ozkan ED, Rojas CS, Hubbs CR, Aceti M, Kilgore M, Kudugunti S, Puthanveettil SV, Sweatt JD, Rusche J, Miller CA. (2015). Pharmacological selectivity within class I histone deacetylases predicts effects on synaptic function and memory rescue. Neuropsychopharmacology. doi:10.1038/npp.2015.93. (PubMed Link)
Kadakkuzha BM, Liu XA, Shankar G, McCrate J, Afinogenova A, Young B, Rizzo A, Fallahi M, Raveendra B, Puthanveettil SV. (2015). Transcriptome analysis reveal enrichment of specific lncRNAs in specific brain regions and neuronal populations. Front Cell Neurosci. 9:63. (PubMed Link)
2014
Rizzo V, Richman J, Puthanveettil SV. (2014). Dissecting mechanisms of brain aging by studying the intrinsic excitability of neurons. Frontiers in Aging Neuroscience. doi:10.3389/fnagi.2014.00337. (PubMed Link)
Kadakkuzha BM, Spicer TP, Chase P, Richman JB, Hodder P, Puthanveettil SV. (2014). High-throughput screening for small molecule modulators of motor protein Kinesin. Assay Drug Dev Technol.12:470-80. doi: 10.1089/adt.2014.579. (PubMed Link)
Liu XA, Kadakkuzha B, Pascal B, Steckler C, Akhmedov K, Yan L, Chalmers M, Puthanveettil SV. (2014) New approach to capture and characterize synaptic proteome. Proc Natl Acad Sci U S A. 2014 Nov 11;111:16154-9. doi: 10.1073/pnas.1401483111. (PubMed Link)
Kadakkuzha BM, Liu XA, Narvaez M, Akhmedov K, *Puthanveettil SV. (2014) Asymmetric localization of natural antisense RNA of neuropeptide sensorin in Aplysia sensory neurons during aging and activity. Front Genet. 5:84. (PubMed Link)
Choi YB, Kadakkuzha BM, Liu XA, Akhmedov K, *Kandel ER, *Puthanveettil SV. (2014) Huntingtin is critical both pre- and postsynaptically for long-term learning-related synaptic plasticity in aplysia. PLoS One. 9:e103004. (PubMed Link)
2013
Akhmedov K, Rizzo V, Kadakkuzha BM, Capo T, *Puthanveettil SV. (2013) Decreased response to acetylcholine during aging of Aplysianeurons R15. PLoS One. DOI: 10.1371/journal.pone.0084793 (PubMed Link)
Akhmedov K, Kadakkuzha BM, Puthanveettil SV. (2013) Aplysia ganglia preparation for electrophysiological and molecular analyses of single neurons. The Journal of Visualized Experiments (JoVE). e51075, doi:10.3791/51075 (PubMed Link)
Puthanveettil, SV (2013) RNA transport and long-term memory storage. RNA Biol. 10:1765-70. (PubMed Link)
Kadakkuzha, BM, Akhmedov, K, Capo, TR, Carvalloza, AC, Fallahi, M, Puthanveettil, SV (2013) Age-associated bidirectional modulation of gene expression in single identified R15 neuron of Aplysia. BMC Genomics. 14:880 (PubMed Link)
Kadakkuzha BH and Puthanveettil SV. (2013) Genomics and proteomics in solving brain complexity. Mol Biosyst. 9:1807-1821. (PubMed Link)
Puthanveettil SV, Antonov I, Kalachikov S, Rajasethupathy P, Choi Y.B, Kohn AB, Citarella M, Yu F, Kar, KA, Kinet M, Morozova I, Russo JJ, Ju J, Moroz LL, Kandel ER. (2013) A strategy to capture and characterize the synaptic transcriptome. Proc Natl Acad Sci USA. 110:7464-7469 (PubMed Link)
Raveendra BL, Siemer A, Puthanveettil SV, Hendrickson WA, McDermot A, Kandel ER. (2013) Characterization of prion-like conformational changes of the neuronal isoform of Aplysia CPEB. Nat Struct Mol Biol. 20:495-501. (PubMed Link)
2012
Liu XA, Rizzo V, Puthanveettil SV. (2012) Pathologies of axonal transport in neurodegenerative diseases. Trans Neurosci. 3:355-372. (PubMed Link)
Jin I, Puthanveettil SV, Udo H, Karl K, Kandel ER, Hawkins RD. (2012) Spontaneous transmitter release is critical for the induction of long-term and intermediate-term facilitation in Aplysia. Proc Natl Acad Sci USA. 109:9131-6. (PubMed Link)
Jin I, Udo H, Rayman JB, Puthanveettil SV, Vishwasrao HD, Kandel ER, Hawkins RD. (2012) Spontaneous transmitter release recruits postsynaptic mechanisms of long-term and intermediate-term facilitation in Aplysia. Proc Natl Acad Sci USA. 109:9137-9142. (PubMed Link)
2011
Puthanveettil SV and Kandel ER. (2011). Molecular mechanisms of initiation and maintenance of long-term memory storage. T. Curran and Y. Christen (eds.), Two Faces of Evil: Cancer and Neurodegeneration, Research and Perspectives in Alzheimer’s Disease. DOI 10.1007/978-3-642-16602-0_13, Springer-Verlag Berlin Heidelberg
Choi YB, Kassabov SR, Jin I, Puthanveettil SV, Karl KA, Lu Y, Kim JH, Bailey CH, Kandel ER. (2011) Neurexin-neuroligin transsynaptic interaction mediates learning-related synaptic remodeling and long-term facilitation in Aplysia. Neuron. 70:468-481. (PubMed Link)
Book Chapter: Du L, Yang T, Puthanveettil SV, and Poovaiah BW. (2011) Decoding of Calcium Signal through Calmodulin: Calmodulin-binding Proteins in Plants. Edited by Sheng Luan, University of California, Berkeley. Pgs 177-235
2009
Rajasethupathy P, Fiumara F, Sheridan R, Betel D, Puthanveettil SV, Russo JJ, Sander S, Tuschl T and Kandel E. (2009) Characterization of small RNAs in Aplysia reveals a role for miR-124 in constraining long-term synaptic plasticity through CREB. Neuron. 63:803-817. (PubMed Link)
2008
Puthanveettil SV, Monje FJ, Miniaci MC, Choi YB, Karl KA, Khandros E, Gawinowicz MA, Sheetz MP and Kandel ER. (2008) A new component in synaptic plasticity: upregulation of kinesin in the neurons of the gill-withdrawal reflex. Cell. 135:960-973. * Faculty of 1000 evaluated (PubMed Link)
Miniaci MC, Kim JH, Puthanveettil SV, Si K, Zhu H, Kandel ER, and Bailey CH. (2008) Sustained CPEB-dependent local protein synthesis is required to stabilize synaptic growth for persistence of long-term facilitation in Aplysia. Neuron. 59:1024-1036. (PubMed Link)
2007
Touzani K, Puthanveettil SV and Kandel ER. (2007) Consolidation of learning strategies during spatial working memory task requires proteins synthesis in the prefrontal cortex. Proc Natl Acad Sci USA. 104:5632-5637. (PubMed Link)
2006
Marti AA, Li X, Jockusch S, Li Z, Raveendra B, Kalachikov S, Russo JJ, Morozova I, Puthanveettil SV, Ju J, Turro NJ. (2006) Pyrene binary probes for unambiguous detection of mRNA using time-resolved fluorescence spectroscopy. Nucleic Acids Res. 34:3161-3168. (PubMed Link)
*Moroz LL, *Edwards JR, *Puthanveettil SV, *Kohn AB, Ha T, Heyland A, Knudsen B, Sahni A, Yu F, Liu L, Jezzini S, Lovell P, Iannucculli W, Chen M, Nguyen T, Sheng H, Shaw R, Kalachikov S, Panchin YV, Farmerie W, Russo JJ, Ju J and Kandel ER. (2006) Neuronal transcriptome of aplysia: neuronal compartments and circuitry. Cell. 127:1453-1467. *equal contributor * Faculty of 1000 evaluated (PubMed Link)
2004
Sathyanarayanan PV and Poovaiah BW. (2004) Decoding Ca2+ signals in plants. CRC Crit Rev Plant Sciences. 23:1-11. (PubMed Link)
2002
Sathyanarayanan PV and Poovaiah BW. (2002) Autophosphorylation-dependent inactivation of plant chimeric calcium/calmodulin dependent protein kinase. Eur J Biochem. 269:2457-2463. (PubMed Link)
2001
Sathyanarayanan PV, Siems WF, Jones JP and Poovaiah BW. (2001) Calcium-stimulated autophosphorylation site of plant chimeric calcium/calmodulin-dependent protein kinase. J Biol Chem. 276:32940-32947. (PubMed Link)
2000
Sathyanarayanan PV, Cremo CR and Poovaiah BW. (2000) Plant chimeric Ca2+ /Calmodulin -dependent protein kinase. Role of the neural visinin-like domain in regulating autophosphorylation and calmodulin binding affinity. J Biol Chem. 275:30417-30422. (PubMed Link)
1999
Poovaiah BW, Xia M, Liu Z, Wang W, Yang T, Sathyanarayanan, PV and Franceschi VR. (1999) Developmental regulation of the gene for chimeric calcium/calmodulin-dependent protein kinase in anthers. Planta. 209:161-171. (PubMed Link)
1997
Mohan, M., Sathyanarayanan, P. V., Kumar, A., Srivastava, M. N., and Nair. S (1997) Molecular mapping of a resistance-specific PCR-based marker linked to a gall midge resistance gene (Gm4t) in rice. Theoretical and Applied Genetics. 95: 777-782.
1996
Reddy AR, Scheffler B, Madhuri G, Srivastava MN, Kumar A, Sathyanarayanan PV, Nair S and Mohan M. (1996) Chalcone synthase in rice (Oryza sativa L.): detection of the CHS protein in seedlings and molecular mapping of the chs locus. Plant Mol Biol. 32:735-743. (PubMed Link)